Virtual Physiological Human research initiative: the future for rational HIV treatment design? Stoica, S Kashif Sadiq, Catherine V Gale, Peter V Coveney. Future HIV Therapy, Sep 2008, Vol. 2, No. 5, Pages 419-425.

Global Healthgrid: e-Science Meets Biomedical Informatics. Peter Sloot, Peter Cobeney, Marian T. Bubak, Anne-Mieke Vandame, Breanndán Ó Nualláin, David van de Vijver and Charles Boucher. Proceedings of HealthGrid 2008. IOS press ISBN 978-I-58603-874-8. Pages 188 - 198, 2008. Editors T. Solomonides et al.

Rapid and Accurate Prediction of Binding Free Energies for Saquinavir-Bound HIV-1 Proteases Stoica et al. JACS, 2008, 130, 2639-2648

Enhanced Decision Support for HIV Drug Resistance Interpretation B. Ó Nualláin; D. van de Vijver; C. Boucher; A. Tirado-Ramos and P.M.A. Sloot , in Proceedings of the 6th European HIV Drug Resistance Workshop, (in press) . Budapest, March 2008.

Virtual Laboratory for Development and Execution of Biomedical Collaborative Applications M.T. Bubak; T. Gubala; M. Malawski; B. Balis; W. Funika; T. Bartynski; E. Ciepiela; D. Harezlak; M. Kasztelnik; J. Kocot; D. Krol; P. Nowakowski; M. Pelczar; J. Wach; M. Assel and A. Tirado-Ramos, in 21th IEEE International Symposium on Computer-Based Medical Systems (CBMS 2008), (in press) . Jyväskylä, Finland, June 2008.

Remote execution of delegated operations with support for automatic selection among multiple communication protocols Tomasz Bartynski; Master of Science Thesis supervised by Marian Bubak; AGH University of Science and Technology, February 2008, Krakow, Poland

Optimization of Application Execution in the ViroLab Virtual Laboratory Maciej Malawski, Joanna Kocot, Eryk Ciepiela, Marian Bubak; in Kracow Grid Workshop 2007 Workshop Proceedings, pp.65-70, ACC CYFRONET AGH 2008

Virtual Laboratory Engine -- GridSpace Engine E. Ciepiela, J. Kocot, T. Gubala, M. Malawski, M. Kasztelnik, M. Bubak; in Kracow Grid Workshop 2007 Workshop Proceedings, pp.53-58, ACC CYFRONET AGH 2008

Invocation of Grid Operations in the ViroLab Virtual Laboratory Tomasz Bartyski, Maciej Malawski, Marian Bubak; in Kracow Grid Workshop 2007 Workshop Proceedings, pp.59-64, ACC CYFRONET AGH 2008

Development and Execution of Collaborative Application on the ViroLab Virtual Laboratory M. Kasztelnik, T. Gubala, M. Malawski, M. Bubak; in Kracow Grid Workshop 2007 Workshop Proceedings, pp.41-46, ACC CYFRONET AGH 2008

ViroLab Virtual Laboratory T. Gubala, B. Balis, M. Malawski, M. Kasztelnik, P. Nowakowski, M. Assel, D. Harezlak, T. Bartynski, J. Kocot, E. Ciepiela, D. Krol, J. Wach, M. Pelczar, W. Funika, M. Bubak; in Kracow Grid Workshop 2007 Workshop Proceedings, pp. 35-40, ACC CYFRONET AGH 2008

Prevalence and Risk Factors for Etravirine Resistance among Patients Failing to Non-Nucleoside Reverse Transcriptase Inhibitors. Lapadula G., Calabrese A., Castelnuovo F., Costarelli S., Quiros-Roldan E., Paraninfo G., Ceresoli F., Manca N., Carosi G., Torti C. Prevalence and Risk Factors for Etravirine Resistance among Patients Failing to Non-Nucleoside Reverse Transcriptase Inhibitors. Antiviral Therapy, in press.

Remote execution of delegated operations with support for automatic selection among multiple communication protocols Tomasz Bartynski:, Master of Science Thesis supervised by Marian Bubak; AGH University of Science and Technology, February 2008, Krakow, Poland;

Provenance Tracking in the Virolab Virtual Laboratory. In Parallel Processing and Applied Mathematics. B. Balis, M. Bubak, and J. Wach.: 7th International Conference, PPAM 2007. Gdansk, Poland, September 9-12, 2007, volume 4967 of Lecture Notes in Computer Science. Springer, 2008. In Print.

Universal Grid Client: Grid Operation Invoker T. Bartynski, M. Malawski, T. Gubala and M. Bubak: 7th International Conference, PPAM\\\'2007. Gdansk, Poland, September 9-12, 2007, volume 4967 of Lecture Notes in Computer Science. Springer, 2008. In Print.

Insights into a Mutation-Assisted Lateral Drug Escape Mechanism from the HIV-1 Protease Active Site Sadiq et al., Biochemistry, 2007, 46, 14865-14877

Monitoring of Component-Based Applications Eryk Ciepiela; Master of Science Thesis supervised by Marian Bubak; AGH University of Science and Technology, June 2007, Krakow, Poland

Optimization of Grid Application Execution Joanna Kocot, Iwona Ryszka; Master of Science Thesis supervised by Marian Bubak; AGH University of Science and Technology, June 2007, Krakow, Poland

Virolab: a distributed Decision Support System for Viral Disease Treatment Peter M.A. Sloot, Alfredo Tirados-Ramos, Gokan Ertaylan, Breanndan O Nuallain, D.van de Vijver, Charels Boucher and Marian Bubak, Grakow 2007 Grid orkshop October 15-17, 2007, Crakow, Poland, pp 33-34

GScript Editor as Part of the ViroLab Presentation Layer W. Funika and P. Pegiel, , in: M. Bubak, M. Turala, and K. Wiatr (Eds.). Proceedings of Cracow\'06 Grid Workshop, Oct 15-18, 2006, Cracow, Poland, ACC Cyfronet AGH, 2007, pp. 320-327.